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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs684051 chr20:44384605 C/T WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs6858114 chr4:77198465 G/A NAAA chr4:76834810-76862204:- 0.52 5.25 2.82E-6 Box Plot
ACC rs6858344 chr4:77198566 G/A NAAA chr4:76834810-76862204:- 0.52 5.25 2.82E-6 Box Plot
ACC rs6863036 chr5:685666 G/T PDCD6 chr5:271736-353971:+ 1.09 5.17 3.78E-6 Box Plot
ACC rs6870825 chr5:96281469 C/T ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs6879678 chr5:96319930 A/C ERAP2 chr5:96211643-96255420:+ 0.87 9.37 9.25E-13 Box Plot
ACC rs6887500 chr5:96277721 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs690152 chr9:98764268 A/G C9orf130 chr9:98568372-98638259:- 0.55 5.07 5.4E-6 Box Plot
ACC rs690455 chr9:98753605 C/T C9orf130 chr9:98568372-98638259:- 0.57 5.44 1.44E-6 Box Plot
ACC rs6909767 chr6:86228109 G/A SNHG5 chr6:86370668-86388454:- 0.67 5.91 2.68E-7 Box Plot
ACC rs6922 chr6:86205323 T/G SNHG5 chr6:86370668-86388454:- 0.68 5.16 3.87E-6 Box Plot
ACC rs6926049 chr6:86266133 G/T SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot
ACC rs6927475 chr6:86206773 G/A SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs6935918 chr6:86283575 G/C SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs6942666 chr7:98203342 T/A TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot